Data Skeptic

Generative AI can struggle to create realistic animals and 2D representations often have mistakes like extra limbs and tails. If 2D wasn’t hard enough, there are researchers working on generative 3D models. 3D models present an extra challenge because there is paucity of training datasets.In this episode, PhD students Sandeep and Oindrila walked us through their work on creating 3D animals using 2D data. Join us to learn about their pipelines, quality control, tie in with iNaturalist, and how this tech could streamline FX pipelines.

Today, we sat down with Dr. Ignacio Escalante Meza to learn about opiliones and treehoppers. Opiliones, known as “daddy long legs” in the US, are understudied arachnids known for their tenacious locomotor behavior, sociality, and chemical communication. Treehoppers communicate through the stems of plants using vibrations. They can signal danger, attract mates, and communicate with their offspring. Join us to learn how researchers turn their vibrations into sound waves and study what they have to say.

Human shipping operations have increased significantly in the past few decades. While that means international trade and cheap goods for humans, it also means the ocean has experienced an increase in noise pollution. This has a measurable negative impact on marine mammals and other aquatic life. Could mathematics be the solution? This interview explores how optimization techniques can guide voyage optimization in a way that handles multiple optimization objectives including fuel cost and sound reduction.

Robbie Moon from the Georgia Tech Scheller College of Business joins us to discuss the analysis of unstructured data and the application of NLP methodologies towards financial data.

Have you ever participated in citizen science? Do you want to? One of the most popular platforms for crowdsourcing biodiversity data is iNaturalist. In addition to being a great science tool, the iNaturalist app can help you identify the organisms you encounter every day. We talked to Executive Director Scott Laurie about how scientists use iNaturalist. We also got to discuss what makes iNaturalist’s AI species recognition so good, and how citizen scientists are constantly providing high-quality training data. Listen in and learn how this fun-to-use tool works, where it's headed, and how you can get involved.

Do you code or are you interested in learning to code? Join us today and hear from three individuals that are at very different stages of their coding journeys. Becky Hansis-O’Neill (also our co-host this season) shares her experiences as a newbie who wants to learn more. Dr. Malia Gehan, a self-taught developer interested in studying plant phenotypes, explains why and how she and her colleagues learned to code and developed PlantCV. Finally, Dr. John Wilmes discusses his work as a professional mathematician and Machine Learning Research Engineer. Whether you are thinking about learning to code or an expert, we’re sure you will see a bit of yourself in this episode.

You’ve heard of Human Computer Interaction (HCI), now get ready for Animal Computer Interaction (ACI). Ilyena has made a career developing computer interfaces for non-human animals. She has worked with dogs, parrots, primates, and even giraffes. This is challenging because animals have a wide range of abilities and preferences. Parrots, for example, use their tongues to make selections on touchscreens. Listen in on our conversation and learn about interface development and testing with animals and how technology may improve animal welfare.

Cat observes great apes in the wild and in the lab to crack the code of their gestural communication. We discussed the challenges and benefits of studying apes in the wild vs in the lab. Cat also shared how her lab identifies and studies ape gestures. It turns out that humans are pretty good at guessing what apes are trying to communicate with one another. Join us in this episode to learn more about the evolution of communication in great apes, and what we can learn from our closest relatives.

In this episode, Kozzy discusses his endeavors to compare the cognitive abilities of humans, animals, and AI programs. Specifically, we discussed object permanence, the ability to understand an object still exists in space even when you can’t see it. Our conversation traverses both philosophical and practical questions surrounding AI evaluation. We also learned about Animal AI 3, a gaming environment developed in Unity where AI programs and humans can go head-to-head to solve different problems in a gaming environment.

Théo Michelot has made a career out of tackling tough ecological questions using time-series data. How do scientists turn a series of GPS location observations over time into useful behavioral data? GPS tech has improved to the point that modern data sets are large and complex. In this episode, Théo takes us through his research and the application of Hidden Markov Models to complex time series data. If you have ever wondered what biologists do with data from those GPS collars you have seen on TV, this is the episode for you!

Brian Taylor shares his research on magnetoreception. Animals like birds and sea turtles use magnetoreception to use the Earth’s magnetic field for navigation, but it’s not a sense that’s well understood. Brian uses animal magnetoreception to engineer new ways to navigate the globe. Even cooler, he also takes hypotheses for how magnetoreception works in animals and uses computational simulations to digitally test them. Check out this episode to hear more about Brian’s research and learn more about this little known sensory ability.

Modeling evolutionary processes goes way beyond the Hardy-Weinberg Equilibrium we all learned in biology class. Natural selection comes from many sources like resources availability, mate preferences, competition. Modeling entire populations of organisms of different species is the holy grail of digital evolution. Join our discussion with evolutionary biologist and software engineer Ben Haller to learn about his work on SLiM and how it helps other biologists model population genetics over time.

It’s almost impossible to think about animal behavior without thinking of dogs! Our canine friends are a subspecies of wolf that has been co-evolving with us for tens of thousands of years. The transition from wolf to pet has required intense natural and artificial selection for behaviors that allow dogs to live alongside humans, but behavior is not so simple. Join us for a discussion with Dr. Jessica Hekman and learn about dog welfare, behavioral genetics, and the quest to understand the dogs in our lives.

In this episode, we are joined by Barbara Webb and Anna Hadjitofi. Barbara runs the Insect Robotics lab at the University of Edinburgh, and Anna is a PhD student at the School of Informatics at the university. She is interested in studying and understanding the neural mechanism of the honeybee waggle dance. They join us to discuss the paper: Dynamic antennal positioning allows honeybee followers to decode the dance.

Many researchers and students have painstakingly labeled precise details about the body positions of the creatures they study. Can AI be used for this labeling? Of course it can! Today's episode discusses Social LEAP Estimates Animal Poses (SLEAP), a software solution to train AI to perform this tedious but important labeling work.

Our guest in this episode is Sebastien Motsch, an assistant professor at Arizona State University, working in the School of Mathematical and Statistical Science. He works on modeling self-organized biological systems to understand how complex patterns emerge.

Our guest in this episode is Ryan Hanscom. Ryan is a Ph.D. candidate in a joint doctoral evolution program at San Diego State University and the University of California, Riverside. He is a terrestrial ecologist with a focus on herpetology and mammalogy. Ryan discussed how the behavior of rattlesnakes is studied in the natural world, particularly with an increase in temperature.

We are joined by Hank Schlinger, a professor of psychology at California State University, Los Angeles. His research revolves around theoretical issues in psychology and behavioral analysis. Hank establishes that words have references and questions the reference for intelligence. He discussed how intelligence can be observed in animals. He also discussed how intelligence is measured in a given context.

On today’s episode, we are joined by Aimee Dunlap. Aimee is an assistant professor at the University of Missouri–St. Louis and the interim director at the Whitney R. Harris World Ecology Center. Aimee discussed how animals perceive information and what they use it for. She discussed the connection between their environment and learning for decision-making. She also discussed the costs required for learning and factors that affect animal learning.

We are joined by Tamar Gutnick, a visiting professor at the University of Naples Federico II, Napoli, Italy. She studies the octopus nervous system and their behavior, focusing on cognition and learning behaviors. Tamar gave a background to the kind of research she does — lab research. She discussed some challenges with observing octopuses in the lab. She discussed some patterns observed by the octopus lifestyle in a controlled setting. Tamar discussed what they know about octopus intelligence. She discussed the octopus nervous system and why they are unique compared to other animals. She discussed how they measure the behavior of octopuses using a video recording and a logger to track brain activity.